This package contains methods for the sequential (real-time, online) analysis of phylogenies and sequence data.
To install the devel version of the package, including vignettes, type:
devtools::install_github("Hackout3/saphy",build_vignettes=TRUE) devtools::install_github(c("bdearlove/treeImbalance","emvolz-phylodynamics/phydynR","Hackout3/saphy"),build_vignettes=TRUE)
Note that this requires the package devtools installed.
Note if using a mac, you will need lgfortran and lquadmath libraries installed before hand in order to compile rhydynR
Maintainer (temporary): Simon Frost (sdwfrost@gmail.com)
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