run_MDS: Dimensionality Reduction Analysis: Multidimensional...

In HuaZou/MyRtools: Statistic Approaches on Data Analysis

Description

MDS use the distance among samples, which calculates through the multiple variables.

Usage

run_MDS(dataset=ExpressionSet, Method="Classic", Group_info="Group")

Arguments

Method,	Character; method for MDS (default: Classic).
Group_info,	Character; the group for plot(default: "Group").
Expression,	ExpressionSet; (Required) ExpressionSet object.

Details

12/2/2021 Guangzhou China

Value

a list object: MDS score Result of PERMANOVA

Author(s)

Hua Zou

Examples

data(ExprSetRawRB)

MDS_res <- run_MDS(dataset=ExprSetRawRB, Method="Classic", Group_info="Group")
MDS_res$MDS

HuaZou/MyRtools documentation built on Jan. 6, 2022, 8:56 a.m.