run_umap: Dimensionality Reduction Analysis: Uniform Manifold...
In HuaZou/MyRtools: Statistic Approaches on Data Analysis

UMAP: a non-linear dimensionality reduction algorithm.

1	run_umap(dataset=ExpressionSet, Group_info="Group")

`Group_info,`	Character; the group for plot(default: "Group").
`Expression,`	ExpressionSet; (Required) ExpressionSet object.

12/2/2021 Guangzhou China

a list object: umap score Result of PERMANOVA

Hua Zou

data(ExprSetRawRB)

umap_res <- run_umap(dataset=ExprSetRawRB, Group_info="Group")
umap_res$umap

HuaZou/MyRtools documentation built on Jan. 6, 2022, 8:56 a.m.

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