run_OrdPlot: Plot Ordination result with scatterplot
In HuaZou/MyRtools: Statistic Approaches on Data Analysis

Description Usage Arguments Details Value Author(s) Examples

Show the result of Ordination using scatterplot.

1	run_Plot(Score=score, Axis_name=explains, Pvalue=label)

`Score,`	Data.frame; (Required) Result of Ordination.
`Axis_name,`	Character; the labels of two axis.
`Pvalue,`	Character; (Required) PERMANOVA result.

12/2/2021 Guangzhou China

a scatterplot

Hua Zou

data(ExprSetRawRB)

PCA_res <- run_PCA(dataset=ExprSetRawRB, Normalization=TRUE, Group_info="Group")
run_OrdPlot(Score=PCA_res$PCA, Axis_name=PCA_res$epn, Pvalue=PCA_res$PER)

res_tsne <- run_tsne(dataset=ExprSetRawRB, Perplexity=20, Group_info="Group")
run_OrdPlot(Score=res_tsne$tsne, Axis_name=res_tsne$epn, Pvalue=res_tsne$PER)