View source: R/fswe.scale_intensities.R
FSWE.scaleIntensities | R Documentation |
It scales FSWE-processed files to a common intensity scale defined by one software reference.
FSWE.scaleIntensities(working_dir = LFQbench.Config$DataRootFolder, fileModelingPattern = "_peptides", filesToModelPattern = ".[\\.].", filesNotToModelPattern = "FILE_I_DONT_WANT_TO_HAVE", softwareReference = "PeakView", softToModelMap = list(), softwareLabels = NULL, outputFileNameSuffix = NULL)
working_dir |
LFQbench-root directory with the subfolder input containing files processed by FSWE that you want to scale |
fileModelingPattern |
pattern for files you want to use for modeling |
filesToModelPattern |
pattern for files to apply the scaling models |
softwareReference |
software name for scaling reference |
Assumption: since we lose at this point the peak retention times, we will assume in this script that most of the peaks detected by different software tools match.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.