View source: R/eset_distribution.R
eset_distribution | R Documentation |
eset_distribution generates boxplots and density plots to analyze the distribution of expression values in an expression set (eset).
eset_distribution(eset, quantile = 3, log = TRUE, project = NULL)
eset |
Expression set (matrix or data frame) containing gene expression data. |
quantile |
Number of quantiles used for sampling columns in the eset matrix. |
log |
Logical value indicating whether to perform log2 transformation of the expression values. |
project |
Optional string specifying the name of the project. If not provided, a default name ('ESET') is used. |
data(eset_gse62254, package = "IOBR")
eset <- anno_eset(eset = eset_gse62254, annotation = anno_hug133plus2)
eset_distribution(eset)
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