JamesStimson/transnp: Transmission inference using SNP data
Conduct transmission inference using SNP data from whole genome sequencing. Takes SNP alignments for clusters, together with sampling dates and some assumptions, and models transmission events and times.
Getting started
Browse package contents
Package details |
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| Author | James Stimson |
| Maintainer | James Stimson <james.stimson16@imperial.ac.uk> |
| License | GPL-3 |
| Version | 0.1.0 |
| URL | https://github.com/JamesStimson/transnp |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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