runMclust: runMclust

In JhuangLab/CytoTree: A Toolkit for Flow And Mass Cytometry Data

Description

Model-based clustering based on parameterized finite Gaussian mixture models. This function is based on Mclust.

Usage

runMclust(object, scale = FALSE, verbose = FALSE, ...)

Arguments

object	a CYT object
scale	logical. Whether to use scaled data in Mclust.
verbose	logical. Whether to print calculation progress.
...	Parameters passing to Mclust function

Value

a CYT object with mclust.id in meta.data

See Also

Mclust

Examples

cyt.file <- system.file("extdata/cyt.rds", package = "CytoTree")
cyt <- readRDS(file = cyt.file)

cyt <- runMclust(cyt, verbose = TRUE)

JhuangLab/CytoTree documentation built on Nov. 16, 2020, 7:23 a.m.