JohnReid/DeLorean: Estimates Pseudotimes for Single Cell Expression Data

Implements the DeLorean model (Reid & Wernisch (2016) <doi:10.1093/bioinformatics/btw372>) to estimate pseudotimes for single cell expression data. The DeLorean model uses a Gaussian process latent variable model to model uncertainty in the capture time of cross-sectional data.

Getting started

Package details

AuthorJohn Reid <[email protected]>
MaintainerJohn Reid <[email protected]>
LicenseMIT + file LICENSE
Version1.5.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("JohnReid/DeLorean")
JohnReid/DeLorean documentation built on Oct. 21, 2018, 3:28 a.m.