JohnReid/DeLorean: Estimates Pseudotimes for Single Cell Expression Data

Implements the DeLorean model (Reid & Wernisch (2016) <doi:10.1093/bioinformatics/btw372>) to estimate pseudotimes for single cell expression data. The DeLorean model uses a Gaussian process latent variable model to model uncertainty in the capture time of cross-sectional data.

Getting started

Package details

AuthorJohn Reid <johnbaronreid@gmail.com>
MaintainerJohn Reid <johnbaronreid@gmail.com>
LicenseMIT + file LICENSE
Version1.5.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("JohnReid/DeLorean")
JohnReid/DeLorean documentation built on Sept. 27, 2021, 5:45 a.m.