estimate.cell.sizes: Estimate the cell sizes. We only consider genes that are...

Description Usage Arguments

View source: R/cell-size.r

Description

Estimate the cell sizes. We only consider genes that are expressed in a certain proportion of cells.

Usage

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estimate.cell.sizes(dl, cell.prop = 0.5, expr.threshold = 0,
  by.capture = TRUE)

Arguments

dl

de.lorean object.

cell.prop

The proportion of cells a gene must be expressed in to be considered for cell size estimation

expr.threshold

The threshold above which we consider a gene to be expressed

by.capture

Estimate the cell sizes by considering the cells at each capture time separately


JohnReid/DeLorean documentation built on Oct. 21, 2018, 3:28 a.m.