fit.model.sample: Fit the model using Stan sampler

In JohnReid/DeLorean: Estimates Pseudotimes for Single Cell Expression Data

Description

Fit the model using Stan sampler

Usage

fit.model.sample(dl, num.cores = getOption("DL.num.cores",
  max(parallel::detectCores() - 1, 1)), chains = 1, thin = 50, ...)

Arguments

dl	de.lorean object
num.cores	Number of cores to run on. Defaults to getOption("DL.num.cores", max(parallel::detectCores()-1, 1))
chains	Number of chains to run on each core
thin	How many samples to generate before retaining one
...	Extra arguments for rstan::stan() sampling call

JohnReid/DeLorean documentation built on Sept. 27, 2021, 5:45 a.m.