filter_cells: Filter cells

In JohnReid/DeLorean: Estimates Pseudotimes for Single Cell Expression Data

Description

Filter cells

Usage

filter_cells(dl, .filter = function(x) x %in% cells, number = NULL,
  cells = sample(colnames(dl$expr), number))

Arguments

dl	de.lorean object
.filter	Function that takes a list of cells as input and returns a vector of TRUE/FALSE
number	Number to sample if filter function or cells not supplied.
cells	The cells to keep.

Examples

data(WindramDeLorean)
dl <- de.lorean(windram.expr, windram.gene.meta, windram.cell.meta)
dl <- filter_cells(dl, number = 7)

JohnReid/DeLorean documentation built on Sept. 27, 2021, 5:45 a.m.