Identify-Trait-Attributes: Identify Trait Attributes

In Jorisvansteenbrugge/TcT: Trait-based Comparative Transcriptomics

Identify Trait Attributes

Description

For each trait (or module) Attributes are calculated

Usage

Identify_Trait_Attributes(
  RNAseq.data,
  pairwise.distances,
  annotation.db,
  threads = 4
)

Arguments

RNAseq.data	Collection of multple components, include RNA seq data, annotations, etc. See Pre_process_input for the full list.
pairwise.distances	Named list containing possibly multiple functions for distance
annotation.db	List containing a dictionary like structure with trait as names and annotation as values.

Author(s)

JJM van Steenbrugge BO Oyserman

Jorisvansteenbrugge/TcT documentation built on Sept. 26, 2022, 6:50 a.m.