API for JulFriedrich/miRetrieve
miRNA Text Mining in Abstracts
| Global functions | |
|---|---|
| add_col_topic | Man page Source code |
| animal_keywords | Man page |
| assign_topic | Man page Source code |
| assign_topic_lda | Man page Source code |
| biomarker_keywords | Man page |
| calculate_score | Source code |
| calculate_score_animals | Man page Source code |
| calculate_score_biomarker | Man page Source code |
| calculate_score_patients | Man page Source code |
| calculate_score_topic | Man page Source code |
| combine_df | Man page Source code |
| combine_mir | Man page Source code |
| combine_stopwords | Man page Source code |
| compare_mir_count | Man page Source code |
| compare_mir_count_log2 | Man page Source code |
| compare_mir_count_unique | Man page Source code |
| compare_mir_terms | Man page Source code |
| compare_mir_terms_log2 | Man page Source code |
| compare_mir_terms_scatter | Man page Source code |
| compare_mir_terms_unique | Man page Source code |
| count_mir | Man page Source code |
| count_mir_perc_threshold | Source code |
| count_mir_threshold | Man page Source code |
| count_mir_total_threshold | Source code |
| count_snp | Man page Source code |
| count_target | Man page Source code |
| count_target_helper | Source code |
| count_words_mir | Source code |
| detect_term | Source code |
| df_crc | Man page |
| df_mirtarbase | Man page |
| df_panc | Man page |
| df_test | Man page |
| extract_mir_df | Man page |
| extract_mir_string | Man page |
| extract_snp | Man page Source code |
| fit_lda | Man page Source code |
| generate_stopwords | Man page Source code |
| get_all_shared_mir | Source code |
| get_distinct_mir_df | Man page Source code |
| get_distinct_mir_vec | Man page Source code |
| get_mir | Man page Source code |
| get_mir_threshold | Source code |
| get_mir_top | Source code |
| get_pmid | Man page Source code |
| get_shared_mir_df | Man page Source code |
| get_shared_mir_vec | Man page Source code |
| get_snp | Man page Source code |
| get_top_words | Source code |
| indicate_mir | Man page Source code |
| indicate_term | Man page Source code |
| join_mirtarbase | Man page Source code |
| join_targets | Man page Source code |
| make_dtm | Source code |
| ngram_stopwords | Man page |
| patients_keywords | Man page |
| plot_lda_term | Man page Source code |
| plot_mir_count | Man page Source code |
| plot_mir_count_threshold | Man page Source code |
| plot_mir_development | Man page Source code |
| plot_mir_new | Man page Source code |
| plot_mir_terms | Man page Source code |
| plot_perplexity | Man page Source code |
| plot_score_animals | Man page Source code |
| plot_score_biomarker | Man page Source code |
| plot_score_patients | Man page Source code |
| plot_score_topic | Man page Source code |
| plot_target_count | Man page Source code |
| plot_target_mir_scatter | Man page Source code |
| plot_wordcloud | Man page Source code |
| prepare_dtm | Source code |
| pretty_breaks_miretrieve | Source code |
| pull_mirnas | Source code |
| read_pubmed | Man page Source code |
| read_pubmed_jats | Man page Source code |
| retrieve_mir | Source code |
| retrieve_polymorphism | Source code |
| save_excel | Man page Source code |
| save_plot | Man page Source code |
| stopwords_2gram | Man page |
| stopwords_miretrieve | Man page |
| stopwords_pubmed | Man page |
| subset_df | Man page Source code |
| subset_mir | Man page Source code |
| subset_mir_threshold | Man page Source code |
| subset_research | Man page Source code |
| subset_review | Man page Source code |
| subset_snp | Man page Source code |
| subset_year | Man page Source code |
| tfidf_words_mir | Source code |
