cluster_manually: Cluster the cells using a manual cutoff
In Kevin-Haigis-Lab/PackageBluishgreen: Classify cells by fluorescence

Description Usage Arguments Value Examples

Cluster the cells using a manual cutoff

1	cluster_manually(ts, value, cutoff, transform = identity)

`ts`	A tissue slide object.
`value`	The name of the column to use for classification. (enquoted)
`cutoff`	A value to use as the cutoff point for the manual classification of the cells.
`transform`	A callable (function) the apply to the data before classification.

The tissue slide object with a value in the "manual_classification" attribute.

pancreas_slide <- tissue_slide(pancreas)
pancreas_slide <- cluster_manually(pancreas_slide,
  fitc,
  cutoff = 4,
  transform = log10
)
get_manual_classification(pancreas_slide)