manual_classification: Manual classification object.
In Kevin-Haigis-Lab/PackageBluishgreen: Classify cells by fluorescence

Description Usage Arguments Value Examples

An S3 class for handling manual classification.

manual_classification(
  assignments = factor(),
  cutoff = NA_real_,
  transform = identity
)

`assignments`	A factor vector of cluster assignments.
`cutoff`	The value used for the manual classification.
`transform`	A callable (function) to transform the data before applying the cutoff classification.

A manual classification that behaves like a factor.

# An empty classification.
manual_classification()

# The numeric assignments will be turned into a factor.
manual_classification(c(1, 2, 1, 2, 1, 1), cutoff = 4000)

# Provide a different function used to transform the data before
# applying the cutoff.
manual_classification(
  c("a", "a", "b", "a", "b"),
  cutoff = 2.5,
  transform = log10
)