Description Usage Arguments Value Examples
Plots the slide with each point representing a cell and the color represents the intensity of FITC.
1 2 3 4 5 6 7 8 | plot_tissue(
ts,
color,
prop = 0.25,
point_size = 0.5,
point_alpha = 0.8,
color_pal = "RdYlBu"
)
|
ts |
Tissue slide object to plot. |
color |
The column to use for coloring each cell. (enquoted) |
prop |
The proportion of cells to plot (too many cells can slow performance). |
point_size |
Size of each point. |
point_alpha |
Transparency of each point. |
color_pal |
A diverging color palette to be passed to
|
A ggplot2 plot
1 | plot_tissue(tissue_slide(pancreas), color = fitc)
|
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