Description Usage Arguments Details Value Author(s) See Also Examples
Plots maximal values of QTL peak measured on the same phenotypes in two crosses.
1 | power.plot(cross1,cross2,scores,qtlThr=5,nPheno=500,verbose=FALSE,...)
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cross1 |
An object of class |
cross2 |
An object of class |
scores |
An object of class scores (result of running of this function). This allows for not recalculating QTL scores everytime user wants to plot them. |
qtlThr |
Threshold for assessing the significance of the QTL peak. |
nPheno |
Nr of phenotypes that will be scanned for QTLs. Phenotypes are selected randomly. |
verbose |
Be verbose. |
... |
Arguments passed to scanone function (see |
Plots maximal values of QTL peak measured on the same phenotypes in two crosses. This give a good comparison of power to detect the QTLs between crosses, if the number of phenotypes scanned is large enough.
An object of class scores containing all the QTL scores calculated during the run of this function. This can be plugged back into the function to avoid unnecessary recalculation of the scores.
Konrad Zych k.zych@rug.nl, Danny Arends Danny.Arends@gmail.com Maintainer: Konrad Zych k.zych@rug.nl
plotMapComparison
- Plotting routine for comparison of two genetic maps.
projectOldMarkers
- Plotting routine for showing how markers from original map are placed on saturated map.
cross.saturate
- Saturate existing map.
cross.denovo
- Create de novo genetic map or chromosome assignment vector.
1 2 | data(testCross)
power.plot(testCross,testCross,nPheno=50)
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