knitr::opts_chunk$set(echo = TRUE)
library(LEEF.analysis)

Invocation from commandline

The report can be generated from the command line by using

```{bash info_invocation, eval = FALSE} Rscript -e "library(LEEF.analysis); sample_dir <- '~/Desktop/'; report_sanity_check();"

\pagebreak

## Do the Sanity check

```r
check <- sanity_check( params$sample_dir )
check

\pagebreak



LEEF-UZH/LEEF.analysis documentation built on Feb. 8, 2025, 11:18 a.m.