classify_bemovi_archive: Classify bemovi data by using the archived data

In LEEF-UZH/LEEF.analysis: Access Functions, Tests and Basic Analysis of the RRD Data from the LEEF Project

Classify bemovi data by using the archived data

Description

Classify bemovi data by using the archived data

Usage

classify_bemovi_archive(
  archive_dir = "/Users/rainerkrug/MountainDuck/LEEFSwift3",
  magnification = 16,
  bemovi_extract_name = "bemovi_extract.yml",
  species_tracked = NULL,
  timestamps,
  classifier_constant_name,
  classifier_increasing_name,
  output,
  exclude_videos = NULL,
  mc.cores = 1
)

Arguments

magnification	the magnification or the bemovi videos to be reclassified
bemovi_extract_name	the name of the .yml containing the parameter for the analysis in the directory of the data. The directory depends on the root_dir, magnification and timestamp
species_tracked	names of the species tracked as a character vector. If NULL the species tracked from the bemovi_extract_file will be used.
timestamps	character vector containing the timestamps to be classified
classifier_constant_name	character vector of name of the classifier for temperature treatment constant including path
classifier_increasing_name	character vector of name of the classifier for temperature treatment increasing including path
output	path to which the classified data will be saved as rds
exclude_videos	file names of videos to exclude. If NULL, all will be used.
mc.cores	number of cores to be used. Defaults to 1

Value

invisible NULL

LEEF-UZH/LEEF.analysis documentation built on Feb. 8, 2025, 11:18 a.m.