reclassPLC | R Documentation |
Reclassify provincial land cover classes into resource types used for
caribouHabitat
. Resource types are groups of land cover classes
expected to be relevant to boreal caribou (Hornseth and Rempel, 2016).
reclassPLC(plc, plcLU = plcToResType)
plc |
raster. Provincial land cover |
plcLU |
Lookup table to convert land cover classes to resource types.
Options are: |
The default lookup table plcToResType
is provided with the package and
assumes Ontario 2001 Provincial Land Cover (PLC) classes. The
fnlcToResType
table for the Ontario Far North Land Cover (FNLC) is
included with the package or you can supply a custom lookup table. The custom
lookup table must have two columns with names "PLCCode" and "ResourceType"
where "PLCCode" is the value in the land cover raster and "ResourceType" is
the corresponding letter code for the resource type. The possible resource
types are included in resTypeCode
and descriptions of these codes can
be found in table S1.3 of supplementary material for
Dyson et. al (2022).
a SpatRaster with classes matching resTypeCode
Hornseth, M.L. and Rempel, R.S., 2016. Seasonal resource selection of woodland caribou (Rangifer tarandus caribou) across a gradient of anthropogenic disturbance. Canadian Journal of Zoology, 94(2), pp.79-93. https://doi.org/10.1139/cjz-2015-0101
Dyson, M., Endicott, S., Simpkins, C., Turner, J. W., Avery-Gomm, S., Johnson, C. A., Leblond, M., Neilson, E. W., Rempel, R., Wiebe, P. A., Baltzer, J. L., Stewart, F. E. C., & Hughes, J. (2022). Existing caribou habitat and demographic models need improvement for Ring of Fire impact assessment: A roadmap for improving the usefulness, transparency, and availability of models for conservation. https://doi.org/10.1101/2022.06.01.494350
Caribou habitat functions:
CaribouHabitat-class
,
calcBinaryUse()
,
caribouHabitat()
,
coefTableHR
,
coefTableStd
,
fnlcToResType
,
loadSpatialInputs()
,
plcToResType
,
rasterizeLineDensity()
,
resTypeCode
,
results()
,
rfuToResType
,
threshTable
,
updateCaribou()
lc <- terra::rast(nrows = 10, ncols = 10, xmin = 0, xmax = 10, ymin = 0,
ymax = 10, crs = "EPSG:5070")
lc[] <- 13 # conifer
lc[1:3, 1:3] <- 1 # open water
lc[3:5, 3:5] <- 11 # deciduous
lc[8:10, 8:10] <- 19 # treed bog
lc[6:7, 6:7] <- 21 #treed fen
resTypes <- reclassPLC(lc)
plot(resTypes)
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