Files in LandSciTech/caribouMetrics
Models and Metrics of Boreal Caribou Demography and Habitat Selection

.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md R/AAAClassDefinitions.R R/applyDist.R R/betaSample.R R/calcBinaryUse.R R/calcRSP.R R/caribouBayesianPM.R R/caribouHabitat.R R/caribouMetrics-package.R R/caribouPopGrowth.R R/checkInputs.R R/combineLinFeat.R R/compositionBiasCorrection.R R/data.R R/dataPrepFns.R R/demographicCoefficients.R R/demographicProjectionApp.R R/demographicRates.R R/disturbanceMetrics.R R/getCoefs.R R/getOutputTables.R R/getPriors.R R/getScenarioDefaults.R R/getSimsNational.R R/inputData.R R/inputDataDisturbance.R R/internal_demog_fns.R R/loadSpatialInputs.R R/movingWindowAvg.R R/plot.R R/plotRes.R R/popGrowthTableJohnsonECCC.R R/processData.R R/rasterizeLineDensity.R R/reclassDist.R R/reclassPLC.R R/results.R R/runScnSet.R R/sampleCoefs.R R/sampleRates.R R/simulateObservations.R R/spatialAlignFns.R
R/sysdata.rda
R/tabAllRes.R R/updateCaribou.R R/updateDisturbance.R README.Rmd README.md
_pkgdown.yml
caribouMetrics.Rproj
data-raw/coefTableHR.R data-raw/coefTableStd.R data-raw/demographicCoefTable.R data-raw/fnlcToResType.R data-raw/hexlogo.R data-raw/lccToResType.R data-raw/plcToResType.R data-raw/resTypeCode.R data-raw/rfuToResType.R data-raw/threshTable.R
data/coefTableHR.rda
data/coefTableStd.rda
data/fnlcToResType.rda
data/plcToResType.rda
data/popGrowthTableJohnsonECCC.rda
data/resTypeCode.rda
data/rfuToResType.rda
data/threshTable.rda
inst/extdata/FNLC_Lookup_table.csv
inst/extdata/anthroDist.tif
inst/extdata/cowCounts.csv
inst/extdata/esker.dbf
inst/extdata/esker.prj
inst/extdata/esker.shp
inst/extdata/esker.shx
inst/extdata/eskerTif.tif
inst/extdata/fireAFFES2020.dbf
inst/extdata/fireAFFES2020.prj
inst/extdata/fireAFFES2020.shp
inst/extdata/fireAFFES2020.shx
inst/extdata/freqStartsByYear.csv
inst/extdata/landCover.tif
inst/extdata/linFeat.dbf
inst/extdata/linFeat.prj
inst/extdata/linFeat.shx
inst/extdata/linFeatTif.tif
inst/extdata/natDist.tif
inst/extdata/populationGrowthTable.csv
inst/extdata/projectPoly.dbf
inst/extdata/projectPoly.prj
inst/extdata/projectPoly.shp
inst/extdata/projectPoly.shx
inst/extdata/rail.dbf
inst/extdata/rail.prj
inst/extdata/rail.shp
inst/extdata/rail.shx
inst/extdata/roads.dbf
inst/extdata/roads.prj
inst/extdata/roads.shp
inst/extdata/roads.shx
inst/extdata/simAgeRatio.csv
inst/extdata/simDisturbance.csv
inst/extdata/simSurvData.csv
inst/extdata/utilities.dbf
inst/extdata/utilities.prj
inst/extdata/utilities.shp
inst/extdata/utilities.shx
inst/templates/JAGS_template.txt
inst/templates/JAGS_template2.txt
man/CaribouHabitat-class.Rd man/DisturbanceMetrics-class.Rd man/calcBinaryUse.Rd man/caribouBayesianPM.Rd man/caribouHabitat.Rd man/caribouMetrics-package.Rd man/caribouPopGrowth.Rd man/coefTableHR.Rd man/coefTableStd.Rd man/compositionBiasCorrection.Rd man/demographicCoefficients.Rd man/demographicProjectionApp.Rd man/demographicRates.Rd man/disturbanceMetrics.Rd
man/figures/README-example-1.png
man/figures/README-example-2.png
man/figures/README-example-3.png
man/figures/README-example-4.png
man/fnlcToResType.Rd man/getOutputTables.Rd man/getPriors.Rd man/getScenarioDefaults.Rd man/getSimsNational.Rd man/loadSpatialInputs.Rd man/plcToResType.Rd man/plot-CaribouHabitat.Rd man/plotRes.Rd man/popGrowthTableJohnsonECCC.Rd man/rasterizeLineDensity.Rd man/reclassDist.Rd man/reclassPLC.Rd man/resTypeCode.Rd man/results.Rd man/rfuToResType.Rd man/roxygen/meta.R man/runScnSet.Rd man/simulateObservations.Rd man/threshTable.Rd man/updateCaribou.Rd man/updateDisturbance.Rd tests/testthat.R
tests/testthat/data/Johnson_figures5_6.csv
tests/testthat/data/demog_resultCompare.rds
tests/testthat/data/dm_resultCompare.rds
tests/testthat/data/resultCompare.rds
tests/testthat/data/resultCompare_raster.rds
tests/testthat/data/simBig3000.rds
tests/testthat/test-caribouBayesianPM.R tests/testthat/test-caribouHabitat.R tests/testthat/test-caribouPopGrowth.R tests/testthat/test-combineLinFeat.R tests/testthat/test-demographics.R tests/testthat/test-disturbanceMetrics.R tests/testthat/test-getOutputTables.R tests/testthat/test-getPriors.R tests/testthat/test-getScenarioDefaults.R tests/testthat/test-getSimsNational.R tests/testthat/test-inputData.R tests/testthat/test-loadSpatialInputs.R tests/testthat/test-messages.R tests/testthat/test-movingWindowAvg.R tests/testthat/test-multirange.R tests/testthat/test-plotRes.R tests/testthat/test-rasterizeLineDensity.R tests/testthat/test-reclassDist.R tests/testthat/test-runScnSet.R tests/testthat/test-simulateObservations.R tests/testthat/test-tabAllRes.R tests/testthat/test-updateCaribou.R tests/testthat/test-updateDisturbance.R
vignettes/.gitignore
vignettes/BayesianDemographicProjection.Rmd vignettes/UI_help.Rmd vignettes/Using_caribouHabitat.Rmd vignettes/Using_disturbanceMetric.Rmd vignettes/caribouDemography.Rmd
vignettes/demogOverTime.png
vignettes/distMetOverTime.png
LandSciTech/caribouMetrics documentation built on Sept. 8, 2024, 8:09 p.m.