Files in LandSciTech/caribouMetrics
Models and Metrics of Boreal Caribou Demography and Habitat Selection
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/AAAClassDefinitions.R
R/applyDist.R
R/betaSample.R
R/calcBinaryUse.R
R/calcRSP.R
R/caribouBayesianPM.R
R/caribouHabitat.R
R/caribouMetrics-package.R
R/caribouPopGrowth.R
R/checkInputs.R
R/combineLinFeat.R
R/compositionBiasCorrection.R
R/data.R
R/dataPrepFns.R
R/demographicCoefficients.R
R/demographicProjectionApp.R
R/demographicRates.R
R/disturbanceMetrics.R
R/getCoefs.R
R/getOutputTables.R
R/getPriors.R
R/getScenarioDefaults.R
R/getSimsNational.R
R/inputData.R
R/inputDataDisturbance.R
R/internal_demog_fns.R
R/loadSpatialInputs.R
R/movingWindowAvg.R
R/plot.R
R/plotRes.R
R/popGrowthTableJohnsonECCC.R
R/processData.R
R/rasterizeLineDensity.R
R/reclassDist.R
R/reclassPLC.R
R/results.R
R/runScnSet.R
R/sampleCoefs.R
R/sampleRates.R
R/simulateObservations.R
R/spatialAlignFns.R
R/sysdata.rda
R/tabAllRes.R
R/updateCaribou.R
R/updateDisturbance.R
README.Rmd
README.md
_pkgdown.yml
caribouMetrics.Rproj
data-raw/coefTableHR.R
data-raw/coefTableStd.R
data-raw/demographicCoefTable.R
data-raw/fnlcToResType.R
data-raw/hexlogo.R
data-raw/lccToResType.R
data-raw/plcToResType.R
data-raw/resTypeCode.R
data-raw/rfuToResType.R
data-raw/threshTable.R
data/coefTableHR.rda
data/coefTableStd.rda
data/fnlcToResType.rda
data/plcToResType.rda
data/popGrowthTableJohnsonECCC.rda
data/resTypeCode.rda
data/rfuToResType.rda
data/threshTable.rda
inst/extdata/FNLC_Lookup_table.csv
inst/extdata/anthroDist.tif
inst/extdata/cowCounts.csv
inst/extdata/esker.dbf
inst/extdata/esker.prj
inst/extdata/esker.shp
inst/extdata/esker.shx
inst/extdata/eskerTif.tif
inst/extdata/fireAFFES2020.dbf
inst/extdata/fireAFFES2020.prj
inst/extdata/fireAFFES2020.shp
inst/extdata/fireAFFES2020.shx
inst/extdata/freqStartsByYear.csv
inst/extdata/landCover.tif
inst/extdata/linFeat.dbf
inst/extdata/linFeat.prj
inst/extdata/linFeat.shx
inst/extdata/linFeatTif.tif
inst/extdata/natDist.tif
inst/extdata/populationGrowthTable.csv
inst/extdata/projectPoly.dbf
inst/extdata/projectPoly.prj
inst/extdata/projectPoly.shp
inst/extdata/projectPoly.shx
inst/extdata/rail.dbf
inst/extdata/rail.prj
inst/extdata/rail.shp
inst/extdata/rail.shx
inst/extdata/roads.dbf
inst/extdata/roads.prj
inst/extdata/roads.shp
inst/extdata/roads.shx
inst/extdata/simAgeRatio.csv
inst/extdata/simDisturbance.csv
inst/extdata/simSurvData.csv
inst/extdata/utilities.dbf
inst/extdata/utilities.prj
inst/extdata/utilities.shp
inst/extdata/utilities.shx
inst/templates/JAGS_template.txt
inst/templates/JAGS_template2.txt
man/CaribouHabitat-class.Rd
man/DisturbanceMetrics-class.Rd
man/calcBinaryUse.Rd
man/caribouBayesianPM.Rd
man/caribouHabitat.Rd
man/caribouMetrics-package.Rd
man/caribouPopGrowth.Rd
man/coefTableHR.Rd
man/coefTableStd.Rd
man/compositionBiasCorrection.Rd
man/demographicCoefficients.Rd
man/demographicProjectionApp.Rd
man/demographicRates.Rd
man/disturbanceMetrics.Rd
man/figures/README-example-1.png
man/figures/README-example-2.png
man/figures/README-example-3.png
man/figures/README-example-4.png
man/fnlcToResType.Rd
man/getOutputTables.Rd
man/getPriors.Rd
man/getScenarioDefaults.Rd
man/getSimsNational.Rd
man/loadSpatialInputs.Rd
man/plcToResType.Rd
man/plot-CaribouHabitat.Rd
man/plotRes.Rd
man/popGrowthTableJohnsonECCC.Rd
man/rasterizeLineDensity.Rd
man/reclassDist.Rd
man/reclassPLC.Rd
man/resTypeCode.Rd
man/results.Rd
man/rfuToResType.Rd
man/roxygen/meta.R
man/runScnSet.Rd
man/simulateObservations.Rd
man/threshTable.Rd
man/updateCaribou.Rd
man/updateDisturbance.Rd
tests/testthat.R
tests/testthat/data/Johnson_figures5_6.csv
tests/testthat/data/demog_resultCompare.rds
tests/testthat/data/dm_resultCompare.rds
tests/testthat/data/resultCompare.rds
tests/testthat/data/resultCompare_raster.rds
tests/testthat/data/simBig3000.rds
tests/testthat/test-caribouBayesianPM.R
tests/testthat/test-caribouHabitat.R
tests/testthat/test-caribouPopGrowth.R
tests/testthat/test-combineLinFeat.R
tests/testthat/test-demographics.R
tests/testthat/test-disturbanceMetrics.R
tests/testthat/test-getOutputTables.R
tests/testthat/test-getPriors.R
tests/testthat/test-getScenarioDefaults.R
tests/testthat/test-getSimsNational.R
tests/testthat/test-inputData.R
tests/testthat/test-loadSpatialInputs.R
tests/testthat/test-messages.R
tests/testthat/test-movingWindowAvg.R
tests/testthat/test-multirange.R
tests/testthat/test-plotRes.R
tests/testthat/test-rasterizeLineDensity.R
tests/testthat/test-reclassDist.R
tests/testthat/test-runScnSet.R
tests/testthat/test-simulateObservations.R
tests/testthat/test-tabAllRes.R
tests/testthat/test-updateCaribou.R
tests/testthat/test-updateDisturbance.R
vignettes/.gitignore
vignettes/BayesianDemographicProjection.Rmd
vignettes/UI_help.Rmd
vignettes/Using_caribouHabitat.Rmd
vignettes/Using_disturbanceMetric.Rmd
vignettes/caribouDemography.Rmd
vignettes/demogOverTime.png
vignettes/distMetOverTime.png
