API for LieberInstitute/spatialLIBD
spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data

Global functions
.update_sce Source code
.update_sce_layer Source code
add10xVisiumAnalysis Man page Source code
add_images Man page Source code
add_key Man page Source code
add_qc_metrics Man page Source code
annotate_registered_cluster Source code
annotate_registered_clusters Man page Source code
app_server Source code
app_ui Source code
check_modeling_results Man page Source code
check_sce Man page Source code
check_sce_layer Man page Source code
check_spe Man page Source code
cluster_export Man page Source code
cluster_import Man page Source code
enough_ram Man page Source code
f_merge Source code
fetch_data Man page Source code
frame_limits Man page Source code
gene_set_enrichment Man page Source code
gene_set_enrichment_plot Man page Source code
geom_spatial Man page Source code
get_colors Man page Source code
golem_add_external_resources Source code
img_edit Man page Source code
img_update Man page Source code
img_update_all Man page Source code
layer_boxplot Man page Source code
layer_matrix_plot Man page Source code
layer_stat_cor Man page Source code
layer_stat_cor_plot Man page Source code
libd_layer_colors Man page
locate_images Man page Source code
multi_gene_pca Man page Source code
multi_gene_sparsity Man page Source code
multi_gene_z_score Man page Source code
prep_stitched_data Man page Source code
read10xVisiumAnalysis Man page Source code
read10xVisiumWrapper Man page Source code
read_barcoded_csv Source code
registration_block_cor Man page Source code
registration_model Man page Source code
registration_pseudobulk Man page Source code
registration_stats_anova Man page Source code
registration_stats_enrichment Man page Source code
registration_stats_pairwise Man page Source code
registration_wrapper Man page Source code
run_app Man page Source code
sce_to_spe Man page Source code
sig_genes_extract Man page Source code
sig_genes_extract_all Man page Source code
sort_clusters Man page Source code
spatialLIBD Man page
spatialLIBD-package Man page
tstats_Human_DLPFC_snRNAseq_Nguyen_topLayer Man page
vis_clus Man page Source code
vis_clus_p Man page Source code
vis_gene Man page Source code
vis_gene_p Man page Source code
vis_grid_clus Man page Source code
vis_grid_gene Man page Source code
LieberInstitute/spatialLIBD documentation built on Nov. 4, 2024, 11:57 a.m.