Man pages for MPIIComputationalEpigenetics/epiRepeatR
epiRepeatR

filterRepRefChip-RepeatEpigenomeCollection-methodfilterRepRefChip-methods
filterRepRefMeth-RepeatEpigenomeCollection-methodfilterRepRefMeth-methods
getAnnot-RepeatEpigenomeCollection-methodgetAnnot-methods
getArgParsergetArgParser
getConfigElementgetConfigElement
getMarks-RepeatEpigenomeCollection-methodgetMarks-methods
getRepeatCovg-RepeatEpigenomeCollection-methodgetRepeatCovg-methods
getRepeatScores-RepeatEpigenomeCollection-methodgetRepeatScores-methods
getRepRef-RepeatEpigenomeCollection-methodgetRepRef-methods
getSampleGroupsgetSampleGroups
getSampleMarkTable-RepeatEpigenomeCollection-methodgetSampleMarkTable-methods
getSamples-RepeatEpigenomeCollection-methodgetSamples-methods
loadConfigloadConfig
loadConfigFromCommandLineloadConfigFromCommandLine
logger.cmd.argslogger.cmd.args
normalizeMatrixnormalizeMatrix
plotRepeatAlignmentStatsplotRepeatAlignmentStats
RepeatEpigenomeCollection-classRepeatEpigenomeCollection Class
runAnalysisrunAnalysis
saveConfigsaveConfig
setConfigElementsetConfigElement
MPIIComputationalEpigenetics/epiRepeatR documentation built on May 10, 2017, 4:04 a.m.