getSampleGroups: getSampleGroups
In MPIIComputationalEpigenetics/epiRepeatR: epiRepeatR

Description Usage Arguments Details Value Author(s)

given a sample annotation table, return the sample groups

1	getSampleGroups(anno, addAll = FALSE, addIndividual = FALSE)

`anno`	sample annotation table. must contain sample ids as row names
`addAll`	flag indicating whether a group containing all samples in the annotation table should also be created
`addIndividual`	flag indicating whether a grouping containing a seperate group for each individual sample should be added

gets the annotation from all columns which don't have only unique or only identical values

a list containing lists of sample identifiers. The first level list contains lists for each applicable column in the annotation table. On the second level, each list contains the sample ids for each group identified in that column

Fabian Mueller

MPIIComputationalEpigenetics/epiRepeatR documentation built on March 22, 2021, 11:09 p.m.