ldsc_rg: Bivariate LDSC
In MRCIEU/TwoSampleMR: Two Sample MR Functions and Interface to MR Base Database
ldsc_rg R Documentation
Bivariate LDSC
Description
Imported here to help estimate sample overlap between studies
Usage
ldsc_rg(id1, id2, ancestry = "infer", snpinfo = NULL, splitsize = 20000)
Arguments
id1
ID 1 to analyse
id2
ID 2 to analyse
ancestry
ancestry of traits 1 and 2 (AFR, AMR, EAS, EUR, SAS) or 'infer' (default) in which case it will try to guess based on allele frequencies
snpinfo
Output from ieugwasr::afl2_list("hapmap3"), or NULL for it to be done automatically
splitsize
How many SNPs to extract at one time. Default=20000
Value
model fit
MRCIEU/TwoSampleMR documentation built on Sept. 28, 2024, 6:51 p.m.
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| ldsc_rg | R Documentation |
Bivariate LDSC
Description
Imported here to help estimate sample overlap between studies
Usage
ldsc_rg(id1, id2, ancestry = "infer", snpinfo = NULL, splitsize = 20000)
Arguments
id1 |
ID 1 to analyse |
id2 |
ID 2 to analyse |
ancestry |
ancestry of traits 1 and 2 (AFR, AMR, EAS, EUR, SAS) or 'infer' (default) in which case it will try to guess based on allele frequencies |
snpinfo |
Output from |
splitsize |
How many SNPs to extract at one time. Default= |
Value
model fit
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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