Files in MRCIEU/gwasglue
GWAS summary data sources connected to analytical tools
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
.travis.yml
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/TwoSampleMR.r
R/clump.r
R/cojo.r
R/coloc.r
R/finemapr.r
R/gassocplot.r
R/harmonise.r
R/pwcoco.r
R/susieR.r
R/utils-pipe.r
README.md
docs/404.html
docs/LICENSE-text.html
docs/LICENSE.html
docs/articles/cojo.html
docs/articles/cojo_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/colocalisation.html
docs/articles/colocalisation_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/colocalisation_files/figure-html/unnamed-chunk-10-1.png
docs/articles/colocalisation_files/figure-html/unnamed-chunk-11-1.png
docs/articles/colocalisation_files/figure-html/unnamed-chunk-7-1.png
docs/articles/finemapping.html
docs/articles/finemapping_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/gwas2020.html
docs/articles/gwas2020_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/index.html
docs/articles/ld_ref.html
docs/articles/ld_ref_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/mr.html
docs/articles/mr_files/accessible-code-block-0.0.1/empty-anchor.js
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/clump_gwasvcf.html
docs/reference/cojo_cond.html
docs/reference/cojo_sumstat_file.html
docs/reference/coloc_to_gassocplot.html
docs/reference/gwasvcf_to_TwoSampleMR.html
docs/reference/gwasvcf_to_coloc.html
docs/reference/gwasvcf_to_finemapr.html
docs/reference/harmonise.html
docs/reference/harmonise_against_ref.html
docs/reference/ieugwasr_to_TwoSampleMR.html
docs/reference/ieugwasr_to_coloc.html
docs/reference/ieugwasr_to_finemapr.html
docs/reference/ieugwasr_to_gassocplot.html
docs/reference/index.html
docs/reference/is_forward_strand.html
docs/reference/make_TwoSampleMR_dat.html
docs/reference/map_variants_to_regions.html
docs/reference/organise_ids.html
docs/reference/pipe.html
docs/reference/read_gwas.html
docs/reference/read_reference.html
docs/reference/set_bc4_files.html
docs/reference/susieR_pipeline.html
docs/reference/write_out.html
inst/extdata/ldetect/AFR.bed
inst/extdata/ldetect/ASN.bed
inst/extdata/ldetect/EUR.bed
inst/hapmap3/hapmap3_autosome.snplist.gz
man/clump_gwasvcf.Rd
man/cojo_cond.Rd
man/cojo_sumstat_file.Rd
man/coloc_to_gassocplot.Rd
man/gwasvcf_to_TwoSampleMR.Rd
man/gwasvcf_to_coloc.Rd
man/gwasvcf_to_finemapr.Rd
man/harmonise.Rd
man/harmonise_against_ref.Rd
man/ieugwasr_to_TwoSampleMR.Rd
man/ieugwasr_to_coloc.Rd
man/ieugwasr_to_finemapr.Rd
man/ieugwasr_to_gassocplot.Rd
man/is_forward_strand.Rd
man/make_TwoSampleMR_dat.Rd
man/map_variants_to_regions.Rd
man/organise_ids.Rd
man/pipe.Rd
man/read_gwas.Rd
man/read_reference.Rd
man/set_bc4_files.Rd
man/susieR_pipeline.Rd
man/write_out.Rd
tests/testthat.R
tests/testthat/test_coloc.r
tests/testthat/test_finemapr.r
tests/testthat/test_gassocplot.r
tests/testthat/test_twosamplemr.r
vignettes/cojo.Rmd
vignettes/colocalisation.Rmd
vignettes/finemapping.Rmd
vignettes/finemapping_experiment.Rmd
vignettes/gwas2020.Rmd
vignettes/ld_ref.Rmd
vignettes/mr.Rmd
