gwasvcf_to_coloc: Generate coloc dataset from vcf files
In MRCIEU/gwasglue: GWAS summary data sources connected to analytical tools
Description
Usage
Arguments
Value
Description
Generate coloc dataset from vcf files
Usage
1
gwasvcf_to_coloc(vcf1, vcf2, chrompos)
Arguments
vcf1
VCF object or path to vcf file
vcf2
VCF object or path to vcf file
chrompos
Character of chr:pos1-pos2
Value
List of datasets to feed into coloc
MRCIEU/gwasglue documentation built on Feb. 15, 2022, 3:25 p.m.
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Description Usage Arguments Value
Description
Generate coloc dataset from vcf files
Usage
1 | gwasvcf_to_coloc(vcf1, vcf2, chrompos)
|
Arguments
vcf1 |
VCF object or path to vcf file |
vcf2 |
VCF object or path to vcf file |
chrompos |
Character of chr:pos1-pos2 |
Value
List of datasets to feed into coloc
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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