data-drpar: Cell viability data from the high-throughput drug screen
In MalgorzataOles/BloodCancerMultiOmics2017: "Drug-perturbation-based stratification of blood cancer" by Dietrich S, Oles M, Lu J et al. - experimental data and complete analysis
drpar R Documentation
Cell viability data from the high-throughput drug screen
Description
This "NChannelSet" object contains normalized (to the control wells) viability
data for 48 h incubation period within the drug screen. Patient samples are
annotated in columns and drugs are annotated in rows. Seven channels are
available: 'viaraw.1', 'viaraw.2', 'viaraw.3', 'viaraw.4', 'viaraw.5' - containing viability
information for drug concentrations from c1 (highest) to c5 (lowest)
respectively (see also conctab), and 'viaraw.1_5', 'viaraw.4_5' -
containing the mean viability of all five concentrations and the two lowest
concentrations used, respectively. pData contains two columns: 'PatientID'
and 'ExpDate'. The second one contains the date at which the ATP content of the
wells after 48 h of incubation was measured.
Usage
drpar
Format
"NChannelSet" object with 249 patient samples (columns) and 64 drugs (rows).
Author(s)
Malgorzata Oles
MalgorzataOles/BloodCancerMultiOmics2017 documentation built on March 29, 2024, 2:29 p.m.
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| drpar | R Documentation |
Cell viability data from the high-throughput drug screen
Description
This "NChannelSet" object contains normalized (to the control wells) viability
data for 48 h incubation period within the drug screen. Patient samples are
annotated in columns and drugs are annotated in rows. Seven channels are
available: 'viaraw.1', 'viaraw.2', 'viaraw.3', 'viaraw.4', 'viaraw.5' - containing viability
information for drug concentrations from c1 (highest) to c5 (lowest)
respectively (see also conctab), and 'viaraw.1_5', 'viaraw.4_5' -
containing the mean viability of all five concentrations and the two lowest
concentrations used, respectively. pData contains two columns: 'PatientID'
and 'ExpDate'. The second one contains the date at which the ATP content of the
wells after 48 h of incubation was measured.
Usage
drpar
Format
"NChannelSet" object with 249 patient samples (columns) and 64 drugs (rows).
Author(s)
Malgorzata Oles
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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