MarioniLab/DropletUtils: Utilities for Handling Single-Cell Droplet Data
Version 1.1.9

Provides a number of utility functions for handling single-cell (RNA-seq) data from droplet technologies such as 10X Genomics. This includes data loading, identification of cells from empty droplets, removal of barcode-swapped pseudo-cells, and downsampling of the count matrix.

Getting started

Package details

Bioconductor views Coverage DataImport GeneExpression RNASeq Sequencing SingleCell Transcriptomics
MaintainerAaron Lun <[email protected]>
LicenseGPL-3
Version1.1.9
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("MarioniLab/DropletUtils")
MarioniLab/DropletUtils documentation built on Aug. 21, 2018, 3:45 a.m.