API for MarioniLab/DropletUtils
Utilities for Handling Single-Cell Droplet Data

Global functions
barcodeRanks Man page Source code
check_indices Source code
compute_multinom_prob_data Source code
compute_multinom_prob_rest Source code
defaultDrops Man page Source code
downsampleMatrix Man page Source code
downsampleReads Man page Source code
emptyDrops Man page Source code
encodeSequences Man page Source code
estimate_alpha Source code
get10xMolInfoStats Man page Source code
get_cell_ordering Source code
makeCountMatrix Man page Source code
monte_carlo_pval Source code
permute_counter Source code
read10xCounts Man page Source code
read10xMatrix Man page Source code
read10xMolInfo Man page Source code
read_from_hdf5 Source code
read_from_sparse Source code
removeSwappedDrops Man page Source code
reorder Source code
scan_mm_file Source code
sim10xMolInfo Source code
simCounts Source code
swappedDrops Man page Source code
testEmptyDrops Man page Source code
type_chooser Source code
write10xCounts Man page Source code
write_hdf5 Source code
write_sparse Source code
MarioniLab/DropletUtils documentation built on Sept. 10, 2018, 6:29 p.m.