Man pages for MarioniLab/DropletUtils
Utilities for Handling Single-Cell Droplet Data

barcodeRanksCalculate barcode ranks
defaultDropsCall cells from number of UMIs
downsampleMatrixDownsample a count matrix
downsampleReadsDownsample reads in a 10X Genomics dataset
emptyDropsIdentify empty droplets
encodeSequencesEncode nucleotide sequences
get10xMolInfoStatsGet 10x cell statistics
makeCountMatrixMake a count matrix
read10xCountsLoad in data from 10x experiment
read10xMatrixRead in the 10x count matrix
read10xMolInfoRead the 10X molecule information file
swappedDropsClean barcode-swapped droplet data
write10xCountsWrite count data in the 10x format
MarioniLab/DropletUtils documentation built on Sept. 10, 2018, 6:29 p.m.