prot_abund_mat: Protein abundance data frame
In MiguelCos/fragNterminomics: Annotation and processing of peptides from FragPipe search results
prot_abund_mat R Documentation
Protein abundance data frame
Description
Normalized values of abundance of identified proteins from the Polycystic Disease mouse model experiment
Usage
prot_abund_mat
Format
A data frame with 5238 rows and 21 variables:
- index
Protein identifier
- number_psm
Number of Peptide-to-spectrum matches for the protein
- max_pep_prob
Max Peptide Probability
- reference_intensity
Normalized intensity values of virtual normalization channel
- ko/wt
Normalized intensity values of protein by sample
- mt_*
Normalized intensity values of empty TMT channels
MiguelCos/fragNterminomics documentation built on Oct. 13, 2023, 5:31 a.m.
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| prot_abund_mat | R Documentation |
Protein abundance data frame
Description
Normalized values of abundance of identified proteins from the Polycystic Disease mouse model experiment
Usage
prot_abund_mat
Format
A data frame with 5238 rows and 21 variables:
- index
Protein identifier
- number_psm
Number of Peptide-to-spectrum matches for the protein
- max_pep_prob
Max Peptide Probability
- reference_intensity
Normalized intensity values of virtual normalization channel
- ko/wt
Normalized intensity values of protein by sample
- mt_*
Normalized intensity values of empty TMT channels
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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