get_ranking_and_test_results: get_ranking_and_test_results

Description Usage Arguments Details Value See Also

Description

Internal function to get reference group similarity contrasts for an individual query qroup.

Usage

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get_ranking_and_test_results(de_table.ref.marked, the_test_group,
  the_test_dataset, the_ref_dataset, num_steps, pval = 0.01)

Arguments

de_table.ref.marked

see make_ref_similarity_names_using_marked

the_test_group

The group to calculate the stats on.

the_test_dataset

see make_ref_similarity_names_using_marked

the_ref_dataset

see make_ref_similarity_names_using_marked

num_steps

see make_ref_similarity_names_using_marked

pval

see make_ref_similarity_names_using_marked

Details

For use by make_ref_similarity_names_using_marked, see that function for parameter details. This function just runs this for a single query group the_test_group

Value

Table of similarity contrast results/assigned names e.t.c for a single group. Used internally for populating mwtest_res_table tables.

See Also

make_ref_similarity_names_using_marked which calls this.


MonashBioinformaticsPlatform/celaref documentation built on June 5, 2019, 11:35 a.m.