plotsNeutralDrift_Fit: Plot data with neutral drift model fit
In MorrisseyLab/CryptDriftR: Analyse crypt lineage tracing data
Description
Usage
Arguments
Value
Examples
View source: R/fit_NeutralDrift.R
Description
plotsNeutralDrift_Fit will plot data and fit of neutral drift model.
Usage
1
plotsNeutralDrift_Fit(fit_vals, max_x = 100)
Arguments
fit_vals
list produced by fitNeutralDrift containing amongst other things the MCMC chains.
max_x
Choose maximum value for the x axis (time)
Value
Return ggplot object with posterior plots.
Examples
1
2
3
4
5
time_points = c(4, 7, 10, 14, 21)
x = simulateNeutralDriftData(0.1, 5, 2, time_points, 8, 300)
fit_out = fitNeutralDrift(x, time_points)
plotsConvergence_Neutral(fit_out)
plotsNeutralDrift_Fit(fit_out)
MorrisseyLab/CryptDriftR documentation built on Aug. 7, 2021, 8:22 p.m.
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Description Usage Arguments Value Examples
View source: R/fit_NeutralDrift.R
Description
plotsNeutralDrift_Fit will plot data and fit of neutral drift model.
Usage
1 | plotsNeutralDrift_Fit(fit_vals, max_x = 100)
|
Arguments
fit_vals |
list produced by fitNeutralDrift containing amongst other things the MCMC chains. |
max_x |
Choose maximum value for the x axis (time) |
Value
Return ggplot object with posterior plots.
Examples
1 2 3 4 5 | time_points = c(4, 7, 10, 14, 21)
x = simulateNeutralDriftData(0.1, 5, 2, time_points, 8, 300)
fit_out = fitNeutralDrift(x, time_points)
plotsConvergence_Neutral(fit_out)
plotsNeutralDrift_Fit(fit_out)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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