Files in MyersGroup/MotifFinder
A Bayesian, De Novo, Joint Motif Finder
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
MotifFinder.Rproj
NAMESPACE
R/auxiliary.R
R/findamotif.R
R/getmotifs.R
R/simulate_sequences.R
README.md
man/cfm.Rd
man/download_PWM.Rd
man/export_FASTA.Rd
man/export_PWM.Rd
man/extract_matches.Rd
man/findamotif.Rd
man/get_PWM.Rd
man/getmotifs.Rd
man/load_sequences.Rd
man/mask_motif.Rd
man/pcm2pwm.Rd
man/plot_motif_location.Rd
man/plot_tomtom_match.Rd
man/pwm2text.Rd
man/read_meme.Rd
man/simulate_sequences.Rd
man/spark_bar.Rd
man/submotif.Rd
tests/testthat.R
tests/testthat/test_motifdiscovery.R
tests/testthat/test_simulation.R
tests/testthat/test_stranded_prior.R
vignettes/vignette.Rmd
vignettes/vignette.md
vignettes/vignette_files/figure-gfm/plotalpha-1.png
vignettes/vignette_files/figure-gfm/plotlocation-1.png
vignettes/vignette_files/figure-gfm/plotlocation-2.png
vignettes/vignette_files/figure-gfm/plotlogo-1.png
vignettes/vignette_files/figure-gfm/plotlogo-2.png
