download_PWM: Download PWM from Jaspar or Hocomoco
In MyersGroup/MotifFinder: A Bayesian, De Novo, Joint Motif Finder
Description
Usage
Arguments
Value
Examples
Description
Download PWM from Jaspar or Hocomoco
Usage
1
download_PWM(id, pseudocount = NULL)
Arguments
id
string; The ID of the motif to download
pseudocount
numeric; value of pseudocount to add to every entry of the PWM (to avoid 0 or 1 counts)
Value
A list of two items, a PWM matrix and a name
Examples
1
download_PWM("ALX1_MOUSE.H11MO.0.B")
MyersGroup/MotifFinder documentation built on June 7, 2019, 3:42 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
Download PWM from Jaspar or Hocomoco
Usage
1 | download_PWM(id, pseudocount = NULL)
|
Arguments
id |
string; The ID of the motif to download |
pseudocount |
numeric; value of pseudocount to add to every entry of the PWM (to avoid 0 or 1 counts) |
Value
A list of two items, a PWM matrix and a name
Examples
1 | download_PWM("ALX1_MOUSE.H11MO.0.B")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.