export_PWM: Export Position-Weight Matrix to file

Description Usage Arguments

Description

Export Position-Weight Matrix to file

Usage

1
export_PWM(pwm, name, file, format = "meme", complement = FALSE)

Arguments

pwm

matrix; a PWM e.g. the output of get_PWM() OR the output of findamotif()

name

character; a name for the motif to include in the file header

file

character; path & filename to save file to e.g. "data/motif1.txt"

format

character; the file format to use, either "uniprobe" or "meme"

complement

logical; if input is a list from findamotif() should the motif be the reverse complment


MyersGroup/MotifFinder documentation built on June 7, 2019, 3:42 p.m.