Man pages for NCBI-Hackathons/SRA2R
What the package does (short line)
| alignReads | Read alignment |
| alignReadsWithRegion | Read alignment |
| getBamReadsWithRegion | The reads in the specified region in an SRA record. |
| getFastqCount | The readCount in the read collection. |
| getFastqReads | The reads in the read collection. |
| getFastqReadsWithQuality | The reads in the read collection. |
| getPileUp | The readCount in the read collection. |
| getReference | The readCount in the read collection. |
| getSRAReadsWithRegion | The reads in the specified region in an SRA record. |
| plotQualityvsDepth.R | Plot quality vs depth for an accession |
| read1 | Example of creating a BStringSet in C++ |
| readCount2 | The readCount in the read collection. |
| reads | The reads in the read collection. |
| refBases | The readCount in the read collection. |
| SRA2R | SRA2R: A bridge between the NCBI Sequence Read Archive (SRA)... |
