alignReads | Read alignment |
alignReadsWithRegion | Read alignment |
getBamReadsWithRegion | The reads in the specified region in an SRA record. |
getFastqCount | The readCount in the read collection. |
getFastqReads | The reads in the read collection. |
getFastqReadsWithQuality | The reads in the read collection. |
getPileUp | The readCount in the read collection. |
getReference | The readCount in the read collection. |
getSRAReadsWithRegion | The reads in the specified region in an SRA record. |
plotQualityvsDepth.R | Plot quality vs depth for an accession |
read1 | Example of creating a BStringSet in C++ |
readCount2 | The readCount in the read collection. |
reads | The reads in the read collection. |
refBases | The readCount in the read collection. |
SRA2R | SRA2R: A bridge between the NCBI Sequence Read Archive (SRA)... |
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