Description Usage Arguments Value Examples
This returns the all reads in the specified region.
1 | getBamReadsWithRegion(acc, refname, start, stop)
|
acc |
An accession or a path to an actual SRA file (with .sra suffix) |
start |
Start position (inclusive) |
stop |
End position (inclusive) |
ref |
The reference name |
the reads in the collection
1 | getBamReadsWithRegion('SRR789392','NC_000020.10', 62926240, 62958722)
|
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