upset.Plot: Upset plot

In NMikolajewicz/scMiko: scRNAseq analysis functions. Developed using Seurat framework.

Upset plot

Description

Generate upset plot, comparing intersection between different (gene)sets. Uses ComplexHeatmap Package.

Usage

upset.Plot(gene.sets, row.title = "", column.title = "")

Arguments

gene.sets	named list of genesets, where names specify name of gene set, and entries are character vectors specifying genes belongs to the respective set.
row.title	Row title.
column.title	Column title.

Value

plot handle

Examples

Generate upset plot for list of genesets
plt.upset <- upset.Plot(gene.sets, row.title = "Genesets")

# print plot
print(plt.upset)

NMikolajewicz/scMiko documentation built on June 28, 2023, 1:41 p.m.