assayDataApply: Apply across an assay

In Nanostring-Biostats/NanoStringExperiment: Base NanoString Experiment Class

Apply across an assay

Description

Apply function row (feature) or column (sample)-wise to selected assay

Apply function row (feature) or column (sample)-wise to selected assay

Usage

assayDataApply(X, MARGIN, FUN, ..., elt = "exprs")

assayDataApply(X, MARGIN, FUN, ..., elt = "exprs")

Arguments

X	NanoStringExperiment object
MARGIN	integer to apply across row or column
FUN	function to apply
...	parameters to pass to FUN
elt	expression matrix for assay element "exprs"

Value

assay data matrix

assay data matrix

Examples

data(exampleNSEData)
assayDataApply(testExp, 1, mean)

data(exampleNSEData)
assayDataApply(testExp, 1, mean, elt="exprs")

Nanostring-Biostats/NanoStringExperiment documentation built on April 28, 2022, 6:24 a.m.