make_se: Create a SummarizedExperiment object from a data frame
In NicWir/VisomX: User-Friendly and Comprehensive Analysis and Visualization of Omics Data
make_se R Documentation
Create a SummarizedExperiment object from a data frame
Description
This function creates a SummarizedExperiment object from a data frame containing protein expression data.
Usage
make_se(proteins_unique, columns, expdesign, log2_transform = TRUE)
Arguments
proteins_unique
A data frame containing the protein expression data
columns
A vector of column numbers containing the numeric expression data
expdesign
A data frame containing the experimental design
log2_transform
A logical value. Whether to log2 transform the data. Default is TRUE.
Value
A SummarizedExperiment object
NicWir/VisomX documentation built on July 17, 2025, 12:08 a.m.
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| make_se | R Documentation |
Create a SummarizedExperiment object from a data frame
Description
This function creates a SummarizedExperiment object from a data frame containing protein expression data.
Usage
make_se(proteins_unique, columns, expdesign, log2_transform = TRUE)
Arguments
proteins_unique |
A data frame containing the protein expression data |
columns |
A vector of column numbers containing the numeric expression data |
expdesign |
A data frame containing the experimental design |
log2_transform |
A logical value. Whether to log2 transform the data. Default is TRUE. |
Value
A SummarizedExperiment object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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