met.plot_ANOVA | R Documentation |
met.plot_ANOVA
visualizes the significance of each compound in the dataset.
met.plot_ANOVA(
mSetObj = NA,
imgName = "ANOVA_plot",
format = "pdf",
dpi = NULL,
width = NA,
subtitle = FALSE,
export = TRUE,
plot = TRUE
)
mSetObj |
Input name of the created mSet object,
Data container after ANOVA analysis ( |
imgName |
(Character) Enter a name for the image file (if |
format |
(Character, |
dpi |
(Numeric) resolution of the image file (if |
width |
(Numeric) width of the the image file in inches (if |
subtitle |
(Logical, |
export |
(Logical, |
plot |
(Logical, |
The input mSet object with added scatter plot with the p value for each compound analyzed. The plot can be retrieved from within R via print(mSetObj$imgSet$anova.plot)
.
(generated by ggplot
).
Nicolas T. Wirth mail.nicowirth@gmail.com Technical University of Denmark License: GNU GPL (>= 2)
adapted from PlotANOVA
(https://github.com/xia-lab/MetaboAnalystR).
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