R/FactorsApi.r

# OpenSilex API
#
# No description provided (generated by Swagger Codegen https://github.com/swagger-api/swagger-codegen)
#
# OpenAPI spec version: 1.0.0-rc+2
# 
# Generated by: https://github.com/swagger-api/swagger-codegen.git

#' @title Factors operations
#' @description opensilexClientToolsR.Factors
#'
#' @field path Stores url path of the request.
#' @field apiClient Handles the client-server communication.
#' @field userAgent Set the user agent of the request.
#'
#' @importFrom R6 R6Class
#'
#' @section Methods:
#' \describe{
#'
#' create_factor Create a factor
#'
#'
#' delete_factor Delete a factor
#'
#'
#' delete_factor_level Delete a factor level
#'
#'
#' get_factor_associated_experiments Get factor associated experiments
#'
#'
#' get_factor_by_uri Get a factor
#'
#'
#' get_factor_level Get a factor level
#'
#'
#' get_factor_level_detail Get a factor level
#'
#'
#' get_factor_levels Get factor levels
#'
#'
#' get_factors_by_ur_is Get a list of factors by their URIs
#'
#'
#' search_categories Search categories
#'
#'
#' search_factor_levels Search factors levels
#'
#'
#' search_factors Search factors
#'
#'
#' update_factor Update a factor
#'
#' }
#'
#' @export
FactorsApi <- R6::R6Class(
  'FactorsApi',
  public = list(
    userAgent = "Swagger-Codegen/1.0.0/r",
    apiClient = NULL,
    initialize = function(apiClient){
      if (!missing(apiClient)) {
        self$apiClient <- apiClient
      }
      else {
        self$apiClient <- ApiClient$new()
      }
    },
    create_factor = function(body,...){
      args <- list(...)
      queryParams <- list()
      headerParams <- character()
      self$apiClient$basePath =  sub("/$", "",get("BASE_PATH",opensilexWSClientR:::configWS))
      if(self$apiClient$basePath == ""){
        stop("Wrong you must first connect with connectToOpenSILEX")
      }
      
      #if (!missing(`authorization`)) {
      #  headerParams['Authorization'] <- authorization
      #}
      #if (!missing(`accept_language`)) {
      #  headerParams['Accept-Language'] <- accept_language
      #}

      if (!missing(`body`)) {
        if(is.list(`body`)){
          bodyList <- lapply(`body`, function(x){x$toJSONString()})
          bodyListPaste <- paste(bodyList, collapse=', ' )
          body <- paste('[',bodyListPaste,']')
        }else{
          body <- paste(`body`$toJSONString())
        }
      } else {
        body <- NULL
      }
     
      urlPath <- "/core/experiments/factors"
      resp <- self$apiClient$callApi(url = paste0(self$apiClient$basePath, urlPath),
                                 method = "POST",
                                 queryParams = queryParams,
                                 headerParams = headerParams,
                                 body = body,
                                 ...)
      method = "POST"
      if (httr::status_code(resp) >= 200 && httr::status_code(resp) <= 299) {
        # void response, no need to return anything
      } else if (httr::status_code(resp) >= 400 && httr::status_code(resp) <= 499) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      } else if (httr::status_code(resp) >= 500 && httr::status_code(resp) <= 599) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      }

    },
    delete_factor = function(uri,...){
      args <- list(...)
      queryParams <- list()
      headerParams <- character()
      self$apiClient$basePath =  sub("/$", "",get("BASE_PATH",opensilexWSClientR:::configWS))
      if(self$apiClient$basePath == ""){
        stop("Wrong you must first connect with connectToOpenSILEX")
      }
      
      #if (!missing(`authorization`)) {
      #  headerParams['Authorization'] <- authorization
      #}
      #if (!missing(`accept_language`)) {
      #  headerParams['Accept-Language'] <- accept_language
      #}

      urlPath <- "/core/experiments/factors/{uri}"
      if (!missing(`uri`)) {
        urlPath <- gsub(paste0("\\{", "uri", "\\}"), `uri`, urlPath)
      }

      resp <- self$apiClient$callApi(url = paste0(self$apiClient$basePath, urlPath),
                                 method = "DELETE",
                                 queryParams = queryParams,
                                 headerParams = headerParams,
                                 body = body,
                                 ...)
      method = "DELETE"
      if (httr::status_code(resp) >= 200 && httr::status_code(resp) <= 299) {
       
        if(method == "GET"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          data <- json$result
          returnedOjects = list()
          for(i in 1:nrow(data)){
            row <- data[i,]
            returnObject <- ObjectUriResponse$new()
            returnObject$fromJSONObject(row)
            returnedOjects = c(returnedOjects,returnObject)
          }
          return(Response$new(json$metadata,returnedOjects, resp, TRUE))
        }
        if(method == "POST" || method == "PUT"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          return(Response$new(json$metadata, json$metadata$datafiles, resp, TRUE))
        }
      } else if (httr::status_code(resp) >= 400 && httr::status_code(resp) <= 499) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      } else if (httr::status_code(resp) >= 500 && httr::status_code(resp) <= 599) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      }

    },
    delete_factor_level = function(uri,...){
      args <- list(...)
      queryParams <- list()
      headerParams <- character()
      self$apiClient$basePath =  sub("/$", "",get("BASE_PATH",opensilexWSClientR:::configWS))
      if(self$apiClient$basePath == ""){
        stop("Wrong you must first connect with connectToOpenSILEX")
      }
      
      #if (!missing(`authorization`)) {
      #  headerParams['Authorization'] <- authorization
      #}
      #if (!missing(`accept_language`)) {
      #  headerParams['Accept-Language'] <- accept_language
      #}

      urlPath <- "/core/experiments/factors/levels/{uri}"
      if (!missing(`uri`)) {
        urlPath <- gsub(paste0("\\{", "uri", "\\}"), `uri`, urlPath)
      }

      resp <- self$apiClient$callApi(url = paste0(self$apiClient$basePath, urlPath),
                                 method = "DELETE",
                                 queryParams = queryParams,
                                 headerParams = headerParams,
                                 body = body,
                                 ...)
      method = "DELETE"
      if (httr::status_code(resp) >= 200 && httr::status_code(resp) <= 299) {
       
        if(method == "GET"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          data <- json$result
          returnedOjects = list()
          for(i in 1:nrow(data)){
            row <- data[i,]
            returnObject <- ObjectUriResponse$new()
            returnObject$fromJSONObject(row)
            returnedOjects = c(returnedOjects,returnObject)
          }
          return(Response$new(json$metadata,returnedOjects, resp, TRUE))
        }
        if(method == "POST" || method == "PUT"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          return(Response$new(json$metadata, json$metadata$datafiles, resp, TRUE))
        }
      } else if (httr::status_code(resp) >= 400 && httr::status_code(resp) <= 499) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      } else if (httr::status_code(resp) >= 500 && httr::status_code(resp) <= 599) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      }

    },
    get_factor_associated_experiments = function(uri,...){
      args <- list(...)
      queryParams <- list()
      headerParams <- character()
      self$apiClient$basePath =  sub("/$", "",get("BASE_PATH",opensilexWSClientR:::configWS))
      if(self$apiClient$basePath == ""){
        stop("Wrong you must first connect with connectToOpenSILEX")
      }
      
      #if (!missing(`authorization`)) {
      #  headerParams['Authorization'] <- authorization
      #}
      #if (!missing(`accept_language`)) {
      #  headerParams['Accept-Language'] <- accept_language
      #}

      urlPath <- "/core/experiments/factors/{uri}/experiments"
      if (!missing(`uri`)) {
        urlPath <- gsub(paste0("\\{", "uri", "\\}"), `uri`, urlPath)
      }

      resp <- self$apiClient$callApi(url = paste0(self$apiClient$basePath, urlPath),
                                 method = "GET",
                                 queryParams = queryParams,
                                 headerParams = headerParams,
                                 body = body,
                                 ...)
      method = "GET"
      if (httr::status_code(resp) >= 200 && httr::status_code(resp) <= 299) {
       
        if(method == "GET"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          data <- json$result
          returnedOjects = list()
          for(i in 1:nrow(data)){
            row <- data[i,]
            returnObject <- ExperimentGetListDTO$new()
            returnObject$fromJSONObject(row)
            returnedOjects = c(returnedOjects,returnObject)
          }
          return(Response$new(json$metadata,returnedOjects, resp, TRUE))
        }
        if(method == "POST" || method == "PUT"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          return(Response$new(json$metadata, json$metadata$datafiles, resp, TRUE))
        }
      } else if (httr::status_code(resp) >= 400 && httr::status_code(resp) <= 499) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      } else if (httr::status_code(resp) >= 500 && httr::status_code(resp) <= 599) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      }

    },
    get_factor_by_uri = function(uri,...){
      args <- list(...)
      queryParams <- list()
      headerParams <- character()
      self$apiClient$basePath =  sub("/$", "",get("BASE_PATH",opensilexWSClientR:::configWS))
      if(self$apiClient$basePath == ""){
        stop("Wrong you must first connect with connectToOpenSILEX")
      }
      
      #if (!missing(`authorization`)) {
      #  headerParams['Authorization'] <- authorization
      #}
      #if (!missing(`accept_language`)) {
      #  headerParams['Accept-Language'] <- accept_language
      #}

      urlPath <- "/core/experiments/factors/{uri}"
      if (!missing(`uri`)) {
        urlPath <- gsub(paste0("\\{", "uri", "\\}"), `uri`, urlPath)
      }

      resp <- self$apiClient$callApi(url = paste0(self$apiClient$basePath, urlPath),
                                 method = "GET",
                                 queryParams = queryParams,
                                 headerParams = headerParams,
                                 body = body,
                                 ...)
      method = "GET"
      if (httr::status_code(resp) >= 200 && httr::status_code(resp) <= 299) {
       
        if(method == "GET"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          data <- json$result
          returnedOjects = list()
          for(i in 1:nrow(data)){
            row <- data[i,]
            returnObject <- FactorDetailsGetDTO$new()
            returnObject$fromJSONObject(row)
            returnedOjects = c(returnedOjects,returnObject)
          }
          return(Response$new(json$metadata,returnedOjects, resp, TRUE))
        }
        if(method == "POST" || method == "PUT"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          return(Response$new(json$metadata, json$metadata$datafiles, resp, TRUE))
        }
      } else if (httr::status_code(resp) >= 400 && httr::status_code(resp) <= 499) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      } else if (httr::status_code(resp) >= 500 && httr::status_code(resp) <= 599) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      }

    },
    get_factor_level = function(uri,...){
      args <- list(...)
      queryParams <- list()
      headerParams <- character()
      self$apiClient$basePath =  sub("/$", "",get("BASE_PATH",opensilexWSClientR:::configWS))
      if(self$apiClient$basePath == ""){
        stop("Wrong you must first connect with connectToOpenSILEX")
      }
      
      #if (!missing(`authorization`)) {
      #  headerParams['Authorization'] <- authorization
      #}
      #if (!missing(`accept_language`)) {
      #  headerParams['Accept-Language'] <- accept_language
      #}

      urlPath <- "/core/experiments/factors/levels/{uri}"
      if (!missing(`uri`)) {
        urlPath <- gsub(paste0("\\{", "uri", "\\}"), `uri`, urlPath)
      }

      resp <- self$apiClient$callApi(url = paste0(self$apiClient$basePath, urlPath),
                                 method = "GET",
                                 queryParams = queryParams,
                                 headerParams = headerParams,
                                 body = body,
                                 ...)
      method = "GET"
      if (httr::status_code(resp) >= 200 && httr::status_code(resp) <= 299) {
       
        if(method == "GET"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          data <- json$result
          returnedOjects = list()
          for(i in 1:nrow(data)){
            row <- data[i,]
            returnObject <- FactorLevelGetDTO$new()
            returnObject$fromJSONObject(row)
            returnedOjects = c(returnedOjects,returnObject)
          }
          return(Response$new(json$metadata,returnedOjects, resp, TRUE))
        }
        if(method == "POST" || method == "PUT"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          return(Response$new(json$metadata, json$metadata$datafiles, resp, TRUE))
        }
      } else if (httr::status_code(resp) >= 400 && httr::status_code(resp) <= 499) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      } else if (httr::status_code(resp) >= 500 && httr::status_code(resp) <= 599) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      }

    },
    get_factor_level_detail = function(uri,...){
      args <- list(...)
      queryParams <- list()
      headerParams <- character()
      self$apiClient$basePath =  sub("/$", "",get("BASE_PATH",opensilexWSClientR:::configWS))
      if(self$apiClient$basePath == ""){
        stop("Wrong you must first connect with connectToOpenSILEX")
      }
      
      #if (!missing(`authorization`)) {
      #  headerParams['Authorization'] <- authorization
      #}
      #if (!missing(`accept_language`)) {
      #  headerParams['Accept-Language'] <- accept_language
      #}

      urlPath <- "/core/experiments/factors/levels/{uri}/details"
      if (!missing(`uri`)) {
        urlPath <- gsub(paste0("\\{", "uri", "\\}"), `uri`, urlPath)
      }

      resp <- self$apiClient$callApi(url = paste0(self$apiClient$basePath, urlPath),
                                 method = "GET",
                                 queryParams = queryParams,
                                 headerParams = headerParams,
                                 body = body,
                                 ...)
      method = "GET"
      if (httr::status_code(resp) >= 200 && httr::status_code(resp) <= 299) {
       
        if(method == "GET"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          data <- json$result
          returnedOjects = list()
          for(i in 1:nrow(data)){
            row <- data[i,]
            returnObject <- FactorLevelGetDetailDTO$new()
            returnObject$fromJSONObject(row)
            returnedOjects = c(returnedOjects,returnObject)
          }
          return(Response$new(json$metadata,returnedOjects, resp, TRUE))
        }
        if(method == "POST" || method == "PUT"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          return(Response$new(json$metadata, json$metadata$datafiles, resp, TRUE))
        }
      } else if (httr::status_code(resp) >= 400 && httr::status_code(resp) <= 499) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      } else if (httr::status_code(resp) >= 500 && httr::status_code(resp) <= 599) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      }

    },
    get_factor_levels = function(uri,...){
      args <- list(...)
      queryParams <- list()
      headerParams <- character()
      self$apiClient$basePath =  sub("/$", "",get("BASE_PATH",opensilexWSClientR:::configWS))
      if(self$apiClient$basePath == ""){
        stop("Wrong you must first connect with connectToOpenSILEX")
      }
      
      #if (!missing(`authorization`)) {
      #  headerParams['Authorization'] <- authorization
      #}
      #if (!missing(`accept_language`)) {
      #  headerParams['Accept-Language'] <- accept_language
      #}

      urlPath <- "/core/experiments/factors/{uri}/levels"
      if (!missing(`uri`)) {
        urlPath <- gsub(paste0("\\{", "uri", "\\}"), `uri`, urlPath)
      }

      resp <- self$apiClient$callApi(url = paste0(self$apiClient$basePath, urlPath),
                                 method = "GET",
                                 queryParams = queryParams,
                                 headerParams = headerParams,
                                 body = body,
                                 ...)
      method = "GET"
      if (httr::status_code(resp) >= 200 && httr::status_code(resp) <= 299) {
       
        if(method == "GET"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          data <- json$result
          returnedOjects = list()
          for(i in 1:nrow(data)){
            row <- data[i,]
            returnObject <- FactorLevelGetDTO$new()
            returnObject$fromJSONObject(row)
            returnedOjects = c(returnedOjects,returnObject)
          }
          return(Response$new(json$metadata,returnedOjects, resp, TRUE))
        }
        if(method == "POST" || method == "PUT"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          return(Response$new(json$metadata, json$metadata$datafiles, resp, TRUE))
        }
      } else if (httr::status_code(resp) >= 400 && httr::status_code(resp) <= 499) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      } else if (httr::status_code(resp) >= 500 && httr::status_code(resp) <= 599) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      }

    },
    get_factors_by_ur_is = function(uris,...){
      args <- list(...)
      queryParams <- list()
      headerParams <- character()
      self$apiClient$basePath =  sub("/$", "",get("BASE_PATH",opensilexWSClientR:::configWS))
      if(self$apiClient$basePath == ""){
        stop("Wrong you must first connect with connectToOpenSILEX")
      }
      
      #if (!missing(`authorization`)) {
      #  headerParams['Authorization'] <- authorization
      #}
      #if (!missing(`accept_language`)) {
      #  headerParams['Accept-Language'] <- accept_language
      #}

      if (!missing(`uris`)) {
        queryParams['uris'] <- uris
      }

      urlPath <- "/core/experiments/factors/by_uris"
      resp <- self$apiClient$callApi(url = paste0(self$apiClient$basePath, urlPath),
                                 method = "GET",
                                 queryParams = queryParams,
                                 headerParams = headerParams,
                                 body = body,
                                 ...)
      method = "GET"
      if (httr::status_code(resp) >= 200 && httr::status_code(resp) <= 299) {
       
        if(method == "GET"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          data <- json$result
          returnedOjects = list()
          for(i in 1:nrow(data)){
            row <- data[i,]
            returnObject <- FactorGetDTO$new()
            returnObject$fromJSONObject(row)
            returnedOjects = c(returnedOjects,returnObject)
          }
          return(Response$new(json$metadata,returnedOjects, resp, TRUE))
        }
        if(method == "POST" || method == "PUT"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          return(Response$new(json$metadata, json$metadata$datafiles, resp, TRUE))
        }
      } else if (httr::status_code(resp) >= 400 && httr::status_code(resp) <= 499) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      } else if (httr::status_code(resp) >= 500 && httr::status_code(resp) <= 599) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      }

    },
    search_categories = function(name,order_by,...){
      args <- list(...)
      queryParams <- list()
      headerParams <- character()
      self$apiClient$basePath =  sub("/$", "",get("BASE_PATH",opensilexWSClientR:::configWS))
      if(self$apiClient$basePath == ""){
        stop("Wrong you must first connect with connectToOpenSILEX")
      }
      
      #if (!missing(`accept_language`)) {
      #  headerParams['Accept-Language'] <- accept_language
      #}

      if (!missing(`name`)) {
        queryParams['name'] <- name
      }

      if (!missing(`order_by`)) {
        queryParams['order_by'] <- order_by
      }

      urlPath <- "/core/experiments/factors/categories"
      resp <- self$apiClient$callApi(url = paste0(self$apiClient$basePath, urlPath),
                                 method = "GET",
                                 queryParams = queryParams,
                                 headerParams = headerParams,
                                 body = body,
                                 ...)
      method = "GET"
      if (httr::status_code(resp) >= 200 && httr::status_code(resp) <= 299) {
       
        if(method == "GET"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          data <- json$result
          returnedOjects = list()
          for(i in 1:nrow(data)){
            row <- data[i,]
            returnObject <- FactorCategoryGetDTO$new()
            returnObject$fromJSONObject(row)
            returnedOjects = c(returnedOjects,returnObject)
          }
          return(Response$new(json$metadata,returnedOjects, resp, TRUE))
        }
        if(method == "POST" || method == "PUT"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          return(Response$new(json$metadata, json$metadata$datafiles, resp, TRUE))
        }
      } else if (httr::status_code(resp) >= 400 && httr::status_code(resp) <= 499) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      } else if (httr::status_code(resp) >= 500 && httr::status_code(resp) <= 599) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      }

    },
    search_factor_levels = function(name,order_by,page,page_size,...){
      args <- list(...)
      queryParams <- list()
      headerParams <- character()
      self$apiClient$basePath =  sub("/$", "",get("BASE_PATH",opensilexWSClientR:::configWS))
      if(self$apiClient$basePath == ""){
        stop("Wrong you must first connect with connectToOpenSILEX")
      }
      
      #if (!missing(`authorization`)) {
      #  headerParams['Authorization'] <- authorization
      #}
      #if (!missing(`accept_language`)) {
      #  headerParams['Accept-Language'] <- accept_language
      #}

      if (!missing(`name`)) {
        queryParams['name'] <- name
      }

      if (!missing(`order_by`)) {
        queryParams['order_by'] <- order_by
      }

      if (!missing(`page`)) {
        queryParams['page'] <- page
      }

      if (!missing(`page_size`)) {
        queryParams['page_size'] <- page_size
      }

      urlPath <- "/core/experiments/factors/factor_levels"
      resp <- self$apiClient$callApi(url = paste0(self$apiClient$basePath, urlPath),
                                 method = "GET",
                                 queryParams = queryParams,
                                 headerParams = headerParams,
                                 body = body,
                                 ...)
      method = "GET"
      if (httr::status_code(resp) >= 200 && httr::status_code(resp) <= 299) {
       
        if(method == "GET"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          data <- json$result
          returnedOjects = list()
          for(i in 1:nrow(data)){
            row <- data[i,]
            returnObject <- FactorDetailsGetDTO$new()
            returnObject$fromJSONObject(row)
            returnedOjects = c(returnedOjects,returnObject)
          }
          return(Response$new(json$metadata,returnedOjects, resp, TRUE))
        }
        if(method == "POST" || method == "PUT"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          return(Response$new(json$metadata, json$metadata$datafiles, resp, TRUE))
        }
      } else if (httr::status_code(resp) >= 400 && httr::status_code(resp) <= 499) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      } else if (httr::status_code(resp) >= 500 && httr::status_code(resp) <= 599) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      }

    },
    search_factors = function(name,description,category,experiment,order_by,page,page_size,...){
      args <- list(...)
      queryParams <- list()
      headerParams <- character()
      self$apiClient$basePath =  sub("/$", "",get("BASE_PATH",opensilexWSClientR:::configWS))
      if(self$apiClient$basePath == ""){
        stop("Wrong you must first connect with connectToOpenSILEX")
      }
      
      #if (!missing(`authorization`)) {
      #  headerParams['Authorization'] <- authorization
      #}
      #if (!missing(`accept_language`)) {
      #  headerParams['Accept-Language'] <- accept_language
      #}

      if (!missing(`name`)) {
        queryParams['name'] <- name
      }

      if (!missing(`description`)) {
        queryParams['description'] <- description
      }

      if (!missing(`category`)) {
        queryParams['category'] <- category
      }

      if (!missing(`experiment`)) {
        queryParams['experiment'] <- experiment
      }

      if (!missing(`order_by`)) {
        queryParams['order_by'] <- order_by
      }

      if (!missing(`page`)) {
        queryParams['page'] <- page
      }

      if (!missing(`page_size`)) {
        queryParams['page_size'] <- page_size
      }

      urlPath <- "/core/experiments/factors"
      resp <- self$apiClient$callApi(url = paste0(self$apiClient$basePath, urlPath),
                                 method = "GET",
                                 queryParams = queryParams,
                                 headerParams = headerParams,
                                 body = body,
                                 ...)
      method = "GET"
      if (httr::status_code(resp) >= 200 && httr::status_code(resp) <= 299) {
       
        if(method == "GET"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          data <- json$result
          returnedOjects = list()
          for(i in 1:nrow(data)){
            row <- data[i,]
            returnObject <- FactorGetDTO$new()
            returnObject$fromJSONObject(row)
            returnedOjects = c(returnedOjects,returnObject)
          }
          return(Response$new(json$metadata,returnedOjects, resp, TRUE))
        }
        if(method == "POST" || method == "PUT"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          return(Response$new(json$metadata, json$metadata$datafiles, resp, TRUE))
        }
      } else if (httr::status_code(resp) >= 400 && httr::status_code(resp) <= 499) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      } else if (httr::status_code(resp) >= 500 && httr::status_code(resp) <= 599) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      }

    },
    update_factor = function(body,...){
      args <- list(...)
      queryParams <- list()
      headerParams <- character()
      self$apiClient$basePath =  sub("/$", "",get("BASE_PATH",opensilexWSClientR:::configWS))
      if(self$apiClient$basePath == ""){
        stop("Wrong you must first connect with connectToOpenSILEX")
      }
      
      #if (!missing(`authorization`)) {
      #  headerParams['Authorization'] <- authorization
      #}
      #if (!missing(`accept_language`)) {
      #  headerParams['Accept-Language'] <- accept_language
      #}

      if (!missing(`body`)) {
        if(is.list(`body`)){
          bodyList <- lapply(`body`, function(x){x$toJSONString()})
          bodyListPaste <- paste(bodyList, collapse=', ' )
          body <- paste('[',bodyListPaste,']')
        }else{
          body <- paste(`body`$toJSONString())
        }
      } else {
        body <- NULL
      }
     
      urlPath <- "/core/experiments/factors"
      resp <- self$apiClient$callApi(url = paste0(self$apiClient$basePath, urlPath),
                                 method = "PUT",
                                 queryParams = queryParams,
                                 headerParams = headerParams,
                                 body = body,
                                 ...)
      method = "PUT"
      if (httr::status_code(resp) >= 200 && httr::status_code(resp) <= 299) {
       
        if(method == "GET"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          data <- json$result
          returnedOjects = list()
          for(i in 1:nrow(data)){
            row <- data[i,]
            returnObject <- ObjectUriResponse$new()
            returnObject$fromJSONObject(row)
            returnedOjects = c(returnedOjects,returnObject)
          }
          return(Response$new(json$metadata,returnedOjects, resp, TRUE))
        }
        if(method == "POST" || method == "PUT"){
          json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
          return(Response$new(json$metadata, json$metadata$datafiles, resp, TRUE))
        }
      } else if (httr::status_code(resp) >= 400 && httr::status_code(resp) <= 499) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      } else if (httr::status_code(resp) >= 500 && httr::status_code(resp) <= 599) {
        json <- jsonlite::fromJSON(httr::content(resp, "text", encoding = "UTF-8"))
        return(Response$new(json$metadata, json, resp, FALSE))
      }

    }
  )
)
OpenSILEX/opensilexClientToolsR documentation built on Jan. 28, 2022, 5:03 a.m.