PMBio/Rslalom: Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data
Version 1.1.2

slalom is a scalable modelling framework for single-cell RNA-seq data that uses gene set annotations to dissect single-cell transcriptome heterogeneity, thereby allowing to identify biological drivers of cell-to-cell variability and model confounding factors.

Getting started

Package details

Bioconductor views DimensionReduction GeneExpression Normalization RNASeq Reactome Sequencing SingleCell Software Transcriptomics Visualization
Maintainer
LicenseGPL-2
Version1.1.2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("PMBio/Rslalom")
PMBio/Rslalom documentation built on April 26, 2018, 6:59 a.m.