SlalomModel: SlalomModel C++ class

In PMBio/Rslalom: Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data

Description

A C++ class for SlalomModel models.

Arguments

Y_init	matrix of expression values
pi_init	G x K matrix with each entry being the prior probability for a gene g being active for factor k.
X_init	matrix of initial factor states (N x K)
W_init	G x K matrix of initial weights
prior_alpha	numeric vector of length two giving prior values for the gamma hyperparameters of the precisions
prior_epsilon	numeric vector of length two giving prior values for the gamma hyperparameters of the residual variances

Value

an object of the SlalomModel class

PMBio/Rslalom documentation built on May 28, 2019, 2:23 p.m.