mesc: A single-cell expression dataset to demonstrate capabilities...

Description Usage Format Value Author(s) Source References

Description

This data set consists of an SCESet object with log2-counts-per-million expression values for 3635 genes for 182 cells. They are from a real experiment, studying cell cycle in mouse embryonic stem cells (mESCs). See Buettner et al (Nat. Biotech., 2015) for details. d.

Usage

1

Format

an SCESet instance, 1 row per gene.

Value

NULL, but makes aavailable an SCESet object containing expression data

Author(s)

Davis McCarthy, Florian Buettner, 2016-12-02

Source

EMBL-EBI, Hinxton, UK

References

Buettner F, Natarajan KN, Paolo Casale F, Proserpio V, Scialdone A, Theis FJ, et al. Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells. Nat Biotechnol. Nature Publishing Group; 2015;33: 155–160.


PMBio/Rslalom documentation built on May 28, 2019, 2:23 p.m.