chain.EASE: chain.EASE()

View source: R/09_EASE_test.R

chain.EASER Documentation

chain.EASE()

Description

Performs EASE.tests on an <.chain> object

Usage

chain.EASE(X, Y)

Arguments

X

any <Query.chain> object

Y

any <Universe.chain> object

Details

Peforms an EASE enrichment test (modified Fisher's Exact) on a <Query.chain> object compared to the same column of a <Universe.chain> object.

The universe file db.intact is provided if you are lacking an universe file.

Value

This function will return a data frame with the results of the tests

Author(s)

Geremy Clair

Examples

chain.EASE(queryExample.chain, universeExample.chain)


PNNL-Comp-Mass-Spec/Rodin documentation built on Jan. 28, 2024, 2:12 a.m.